BT304: BioCconvert: A Conversion Tool Between BioC and PubAnnotation

TitleBT304: BioCconvert: A Conversion Tool Between BioC and PubAnnotation
Publication TypeConference Paper
Year of Publication2016
AuthorsComeau DC, Do─čan RIslamaj, Kim S, Wei C-H, W. Wilbur J, Lu Z
Conference NameInternational Conference on Biomedical Ontology and BioCreative (ICBO BioCreative 2016)
Date Published11/30/16
PublisherCEUR-ws.org Volume 1747
Other NumbersVol-1747|urn:nbn:de:0074-1747-1
Abstract

BioC is a simple XML data format for text, annotations, and relations. PubAnnotation is a repository of text annotations focused on the life science literature. A conversion tool between BioC XML and the JSON import / export format of PubAnnotation has been developed, BioCconvert. As a demonstration, the Ab3P gold standard abbreviation annotations are being made available through PubAnnotation.

URLhttp://ceur-ws.org/Vol-1747/BT304_ICBO2016.pdf